PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_15566
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 301aa    MW: 32113.7 Da    PI: 10.0085
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_15566genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.8e-2097147256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aaka+++a+++++g+
  PEQU_15566  97 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAAKAYDEAALRFRGN 147
                 7********.**********7.....337*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-1397146IPR001471AP2/ERF domain
CDDcd000184.24E-2097156No hitNo description
PROSITE profilePS5103225.40997154IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-3297155IPR001471AP2/ERF domain
SMARTSM003802.9E-3697160IPR001471AP2/ERF domain
SuperFamilySSF541715.49E-2297155IPR016177DNA-binding domain
PRINTSPR003671.5E-1198109IPR001471AP2/ERF domain
PRINTSPR003671.5E-11120136IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MDRAAAAAPS SSSSFISPGG GGGGGGIKRE REELMSPKSV RHYRGFFAGE SSTSSAAPKQ  60
SRQSYLAIAQ SPFSSTPATL QEPPTLPPDT EKEVHRRYRG VRQRPWGKWA AEIRDPHKAA  120
RVWLGTFETA EAAAKAYDEA ALRFRGNKAK LNFPEAVQLQ QPINVSPAIR LTESGPPART  180
TEPVWPSSLS QTMGMARDYV EYSRLLQGTG EYQGMPPTAL LDQLMHSSSS MASTSHKEPS  240
FGSHSVSSPP FSISSSYSAA AEAGRQMGVF WPPGGGTNTS PSSPSSSPPW NASAMDPPRS  300
G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2398158667ATERF1
3gcc_A2e-2398158667ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008784254.12e-52PREDICTED: ethylene-responsive transcription factor ERF110-like
TrEMBLM0TNK32e-46M0TNK3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P08000_0017e-46(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5084822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.15e-28ethylene response factor 110